STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001439915_02674Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_001439915_04222
Unannotated protein.
    0.853
GCA_001439915_01504
Unannotated protein.
    0.847
GCA_001439915_01532
Unannotated protein.
 
   
0.809
GCA_001439915_01415
Unannotated protein.
     
 0.746
GCA_001439915_03409
Unannotated protein.
  
 
 0.691
GCA_001439915_02588
Unannotated protein.
    
 0.621
GCA_001439915_02589
Unannotated protein.
    
 0.621
GCA_001439915_01506
Unannotated protein.
 
 
  0.610
GCA_001439915_01531
Unannotated protein.
  
    0.607
GCA_001439915_01567
Unannotated protein.
  
    0.607
Your Current Organism:
Bacillus humi
NCBI taxonomy Id: 263474
Other names: B. humi, Bacillus humi Heyrman et al. 2005, DSM 16318, LMG 22167, LMG:22167
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.