STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTO1139Hypothetical protein. (97 aa)    
Predicted Functional Partners:
tgtA
Queunine/archaeosine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
   
 
 0.844
PTO1138
Isomerizing glucosamine--fructose-6-phosphate aminotransferase.
  
 
 0.717
PTO0158
TPR-repeat-containing protein.
  
 
 0.614
PTO0847
Tetratricopeptide repeat family protein.
  
 
 0.614
PTO1142
Hypothetical protein.
  
 
 0.614
PTO1140
DNA/pantothenate metabolism flavoprotein.
       0.589
PTO1134
Cytochrome b.
  
    0.485
PTO1135
Hypothetical protein.
       0.470
PTO1136
Hypothetical protein.
       0.470
PTO1137
Hypothetical protein.
       0.470
Your Current Organism:
Picrophilus torridus
NCBI taxonomy Id: 263820
Other names: P. torridus DSM 9790, Picrophilus torridus DSM 9790, Picrophilus torridus DSM9790, Picrophilus torridus str. DSM 9790, Picrophilus torridus strain DSM 9790
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.