Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAZ59403.1 | AAZ60840.1 | Reut_A0021 | Reut_A1470 | Taurine dioxygenase. | Binding-protein-dependent transport systems inner membrane component. | 0.733 |
AAZ59403.1 | AAZ60842.1 | Reut_A0021 | Reut_A1472 | Taurine dioxygenase. | Taurine ABC transporter, periplasmic binding protein. | 0.789 |
AAZ59403.1 | tauB | Reut_A0021 | Reut_A1471 | Taurine dioxygenase. | ABC transporter related protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.824 |
AAZ59711.1 | AAZ60842.1 | Reut_A0329 | Reut_A1472 | Nitrate transport permease. | Taurine ABC transporter, periplasmic binding protein. | 0.741 |
AAZ59711.1 | AAZ61467.1 | Reut_A0329 | Reut_A2103 | Nitrate transport permease. | Binding-protein-dependent transport systems inner membrane component. | 0.687 |
AAZ59711.1 | tauB | Reut_A0329 | Reut_A1471 | Nitrate transport permease. | ABC transporter related protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.843 |
AAZ60840.1 | AAZ59403.1 | Reut_A1470 | Reut_A0021 | Binding-protein-dependent transport systems inner membrane component. | Taurine dioxygenase. | 0.733 |
AAZ60840.1 | AAZ60842.1 | Reut_A1470 | Reut_A1472 | Binding-protein-dependent transport systems inner membrane component. | Taurine ABC transporter, periplasmic binding protein. | 0.995 |
AAZ60840.1 | AAZ65144.1 | Reut_A1470 | Reut_B5801 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.418 |
AAZ60840.1 | tauB | Reut_A1470 | Reut_A1471 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter related protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.998 |
AAZ60842.1 | AAZ59403.1 | Reut_A1472 | Reut_A0021 | Taurine ABC transporter, periplasmic binding protein. | Taurine dioxygenase. | 0.789 |
AAZ60842.1 | AAZ59711.1 | Reut_A1472 | Reut_A0329 | Taurine ABC transporter, periplasmic binding protein. | Nitrate transport permease. | 0.741 |
AAZ60842.1 | AAZ60840.1 | Reut_A1472 | Reut_A1470 | Taurine ABC transporter, periplasmic binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.995 |
AAZ60842.1 | AAZ61339.1 | Reut_A1472 | Reut_A1975 | Taurine ABC transporter, periplasmic binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.855 |
AAZ60842.1 | AAZ61467.1 | Reut_A1472 | Reut_A2103 | Taurine ABC transporter, periplasmic binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.838 |
AAZ60842.1 | AAZ62080.1 | Reut_A1472 | Reut_A2719 | Taurine ABC transporter, periplasmic binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.902 |
AAZ60842.1 | AAZ64235.1 | Reut_A1472 | Reut_B4887 | Taurine ABC transporter, periplasmic binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.910 |
AAZ60842.1 | AAZ64314.1 | Reut_A1472 | Reut_B4966 | Taurine ABC transporter, periplasmic binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.860 |
AAZ60842.1 | AAZ65144.1 | Reut_A1472 | Reut_B5801 | Taurine ABC transporter, periplasmic binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.843 |
AAZ60842.1 | tauB | Reut_A1472 | Reut_A1471 | Taurine ABC transporter, periplasmic binding protein. | ABC transporter related protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family. | 0.998 |
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