STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ61091.1Rhs element Vgr protein. (642 aa)    
Predicted Functional Partners:
AAZ61093.1
Protein of unknown function DUF1305.
 
  
 0.983
AAZ61096.1
Protein of unknown function DUF796.
 
  
 0.983
AAZ61098.1
Uncharacterized conserved protein UCP028301.
 
  
 0.970
AAZ61079.1
ImpA, N-terminal.
 
  
 0.968
AAZ61092.1
AAA ATPase, central region:Clp, N terminal; Belongs to the ClpA/ClpB family.
 
  
 0.968
AAZ61094.1
Protein of unknown function DUF879, bacterial.
 
  
 0.966
AAZ61095.1
Protein of unknown function DUF1316.
 
  
 0.965
AAZ59395.1
Rhs element Vgr protein.
 
 
0.936
AAZ64613.1
Rhs element Vgr protein.
 
 
0.936
AAZ64620.1
Protein of unknown function DUF1305.
 
  
 0.933
Your Current Organism:
Cupriavidus pinatubonensis
NCBI taxonomy Id: 264198
Other names: C. pinatubonensis JMP134, Cupriavidus necator JMP134, Cupriavidus pinatubonensis JMP134, Ralstonia eutropha JMP134, Ralstonia eutropha str. JMP134, Ralstonia eutropha strain JMP134, Ralstonia sp. JMP134, Wautersia eutropha JMP134
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