STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ61315.1Malate synthase; Belongs to the malate synthase family. (528 aa)    
Predicted Functional Partners:
AAZ61325.1
Isocitrate lyase.
 
 0.999
AAZ59766.1
Isocitrate lyase.
 
 0.990
AAZ61803.1
Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)/phosphate acetyltransferase.
  
 
 0.976
AAZ62208.1
Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)., Phosphate acetyltransferase.
  
 
 0.976
AAZ63130.1
Phosphotransacetylase.
  
 
 0.959
AAZ60008.1
Phosphate butyryltransferase.
  
 
 0.958
AAZ60573.1
Phosphate butyryltransferase.
  
 
 0.958
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
   
 0.949
AAZ60475.1
AMP-dependent synthetase and ligase.
  
 0.948
AAZ61186.1
AMP-dependent synthetase and ligase.
  
 0.948
Your Current Organism:
Cupriavidus pinatubonensis
NCBI taxonomy Id: 264198
Other names: C. pinatubonensis JMP134, Cupriavidus necator JMP134, Cupriavidus pinatubonensis JMP134, Ralstonia eutropha JMP134, Ralstonia eutropha str. JMP134, Ralstonia eutropha strain JMP134, Ralstonia sp. JMP134, Wautersia eutropha JMP134
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