Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAZ61934.1 | AAZ61936.1 | Reut_A2573 | Reut_A2575 | Prephenate dehydrogenase. | Prephenate dehydratase. | 0.991 |
AAZ61934.1 | aroA | Reut_A2573 | Reut_A2572 | Prephenate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.991 |
AAZ61934.1 | aroB | Reut_A2573 | Reut_A3129 | Prephenate dehydrogenase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.832 |
AAZ61934.1 | aroC | Reut_A2573 | Reut_A1257 | Prephenate dehydrogenase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.866 |
AAZ61934.1 | aroK-2 | Reut_A2573 | Reut_A3130 | Prephenate dehydrogenase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.556 |
AAZ61934.1 | cmk | Reut_A2573 | Reut_A2570 | Prephenate dehydrogenase. | Cytidylate kinase. | 0.831 |
AAZ61934.1 | hisC1 | Reut_A2573 | Reut_A2574 | Prephenate dehydrogenase. | Aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.987 |
AAZ61934.1 | serC | Reut_A2573 | Reut_A2576 | Prephenate dehydrogenase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.760 |
AAZ61936.1 | AAZ61934.1 | Reut_A2575 | Reut_A2573 | Prephenate dehydratase. | Prephenate dehydrogenase. | 0.991 |
AAZ61936.1 | AAZ64377.1 | Reut_A2575 | Reut_B5029 | Prephenate dehydratase. | Shikimate dehydrogenase. | 0.732 |
AAZ61936.1 | aroA | Reut_A2575 | Reut_A2572 | Prephenate dehydratase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.962 |
AAZ61936.1 | aroB | Reut_A2575 | Reut_A3129 | Prephenate dehydratase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. | 0.758 |
AAZ61936.1 | aroC | Reut_A2575 | Reut_A1257 | Prephenate dehydratase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.990 |
AAZ61936.1 | aroE | Reut_A2575 | Reut_A2855 | Prephenate dehydratase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.809 |
AAZ61936.1 | aroK-2 | Reut_A2575 | Reut_A3130 | Prephenate dehydratase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.776 |
AAZ61936.1 | cmk | Reut_A2575 | Reut_A2570 | Prephenate dehydratase. | Cytidylate kinase. | 0.712 |
AAZ61936.1 | hisC1 | Reut_A2575 | Reut_A2574 | Prephenate dehydratase. | Aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.987 |
AAZ61936.1 | serC | Reut_A2575 | Reut_A2576 | Prephenate dehydratase. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.968 |
AAZ64377.1 | AAZ61936.1 | Reut_B5029 | Reut_A2575 | Shikimate dehydrogenase. | Prephenate dehydratase. | 0.732 |
AAZ64377.1 | aroA | Reut_B5029 | Reut_A2572 | Shikimate dehydrogenase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.744 |
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