STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pc1080Conserved hypothetical protein. (655 aa)    
Predicted Functional Partners:
pc0720
Similar to serine/threonine phosphoprotein phosphatase.
 
 
 0.888
pc1391
Conserved hypothetical protein.
 
 
 
 0.882
aas
Similar to bifunctional AAS protein.
 
  
 0.773
pc1124
Similar to calcium-dependent protein kinase 9.
 
  
 0.729
pc0581
Conserved hypothetical protein.
  
     0.724
pc1057
Conserved hypothetical protein.
  
     0.715
pc0607
Hypothetical protein.
  
     0.698
pkn
Similar to serine/threonine protein kinase.
  
0.697
pc0585
Hypothetical protein.
  
    0.696
pc0742
Conserved hypothetical protein.
  
     0.695
Your Current Organism:
Protochlamydia amoebophila
NCBI taxonomy Id: 264201
Other names: C. Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila str. UWE25, Candidatus Protochlamydia amoebophila strain UWE25, Parachlamydia sp. UWE25, Parachlamydia-related symbiont UWE25, endosymbiont of Acanthamoeba sp. UWE25
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