STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pc1490Similar to aspartyl aminopeptidase (metalloprotease). (434 aa)    
Predicted Functional Partners:
cysS
Similar to cysteinyl tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.528
pc1489
Unknown protein.
       0.506
aas
Similar to bifunctional AAS protein.
   
 
 0.477
pc0037
Similar to metalloprotease.
  
     0.412
pc1958
Similar to metalloproteinase.
  
     0.408
pc1965
Similar to metalloproteinase.
  
     0.404
Your Current Organism:
Protochlamydia amoebophila
NCBI taxonomy Id: 264201
Other names: C. Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila str. UWE25, Candidatus Protochlamydia amoebophila strain UWE25, Parachlamydia sp. UWE25, Parachlamydia-related symbiont UWE25, endosymbiont of Acanthamoeba sp. UWE25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.