Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fmt | gcvT | pc0404 | pc0281 | Probable methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Strongly similar to glycine cleavage system T protein. | 0.933 |
fmt | ptc1 | pc0404 | pc1729 | Probable methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Similar to phosphoprotein phosphatase. | 0.685 |
fmt | rsmB | pc0404 | pc0397 | Probable methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Similar to 16S rRNA m5C967 SAM-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.973 |
gcvT | fmt | pc0281 | pc0404 | Strongly similar to glycine cleavage system T protein. | Probable methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.933 |
gcvT | ptc1 | pc0281 | pc1729 | Strongly similar to glycine cleavage system T protein. | Similar to phosphoprotein phosphatase. | 0.655 |
pc0048 | pc0676 | pc0048 | pc0676 | Hypothetical protein. | Conserved hypothetical protein. | 0.405 |
pc0048 | ptc1 | pc0048 | pc1729 | Hypothetical protein. | Similar to phosphoprotein phosphatase. | 0.677 |
pc0676 | pc0048 | pc0676 | pc0048 | Conserved hypothetical protein. | Hypothetical protein. | 0.405 |
pc0676 | pc0754 | pc0676 | pc0754 | Conserved hypothetical protein. | Hypothetical protein. | 0.721 |
pc0676 | ptc1 | pc0676 | pc1729 | Conserved hypothetical protein. | Similar to phosphoprotein phosphatase. | 0.711 |
pc0754 | pc0676 | pc0754 | pc0676 | Hypothetical protein. | Conserved hypothetical protein. | 0.721 |
pc0754 | pc1832 | pc0754 | pc1832 | Hypothetical protein. | Hypothetical protein. | 0.491 |
pc0754 | ptc1 | pc0754 | pc1729 | Hypothetical protein. | Similar to phosphoprotein phosphatase. | 0.671 |
pc1123 | pc1124 | pc1123 | pc1124 | Unknown protein. | Similar to calcium-dependent protein kinase 9. | 0.672 |
pc1123 | ptc1 | pc1123 | pc1729 | Unknown protein. | Similar to phosphoprotein phosphatase. | 0.636 |
pc1124 | pc1123 | pc1124 | pc1123 | Similar to calcium-dependent protein kinase 9. | Unknown protein. | 0.672 |
pc1124 | pkn | pc1124 | pc1401 | Similar to calcium-dependent protein kinase 9. | Similar to serine/threonine protein kinase. | 0.779 |
pc1124 | ptc1 | pc1124 | pc1729 | Similar to calcium-dependent protein kinase 9. | Similar to phosphoprotein phosphatase. | 0.717 |
pc1124 | rsmB | pc1124 | pc0397 | Similar to calcium-dependent protein kinase 9. | Similar to 16S rRNA m5C967 SAM-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.477 |
pc1832 | pc0754 | pc1832 | pc0754 | Hypothetical protein. | Hypothetical protein. | 0.491 |
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