STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pc1894Unknown protein. (195 aa)    
Predicted Functional Partners:
pc1892
Unknown protein.
  
 
 0.944
gspE
Strongly similar to protein of the general secretion pathway.
  
 
 0.913
gspF
Similar to protein of the general secretion pathway.
  
  
 0.906
pc1895
Conserved hypothetical protein.
       0.808
pc1891
Unknown protein.
       0.794
pc1893
Unknown protein.
       0.773
gspD-2
Similar to protein of the general secretion pathway; Belongs to the bacterial secretin family.
  
  
 0.754
pc1890
Conserved hypothetical protein.
       0.606
pc1899
Conserved hypothetical protein.
       0.467
pc1886
Conserved hypothetical protein.
       0.406
Your Current Organism:
Protochlamydia amoebophila
NCBI taxonomy Id: 264201
Other names: C. Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila UWE25, Candidatus Protochlamydia amoebophila str. UWE25, Candidatus Protochlamydia amoebophila strain UWE25, Parachlamydia sp. UWE25, Parachlamydia-related symbiont UWE25, endosymbiont of Acanthamoeba sp. UWE25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.