STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpiARibose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (233 aa)    
Predicted Functional Partners:
rpe
Ribulose-phosphate 3-epimerase; EC 5.1.3.1; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.957
tkt
Transketolase; EC 2.2.1.1; Belongs to the transketolase family.
   
 0.951
gnd
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 
 0.924
kprS
Ribose-phosphate pyrophosphokinase; EC 2.7.6.1.
  
 
 0.919
CF0372
Conserved hypothetical protein.
       0.845
yqgE
Transcription regulator; Belongs to the UPF0301 (AlgH) family.
       0.799
CF0370
Hypothetical protein.
       0.773
gsa
Glutamate-1-semialdehyde 2,1-aminomutase; EC 5.4.3.8.
  
    0.659
abc1
ABC transporter.
       0.588
abc2
ABC transporter.
       0.583
Your Current Organism:
Chlamydia felis
NCBI taxonomy Id: 264202
Other names: C. felis Fe/C-56, Chlamydia felis Fe/C-56, Chlamydophila felis Fe/C-56
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