Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
aas | pkn2 | CF0169 | CF0386 | Acyl-coenzyme A synthetase; EC 6.2.1.3. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.609 |
aas | pkn3 | CF0169 | CF0966 | Acyl-coenzyme A synthetase; EC 6.2.1.3. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.546 |
aas | recC | CF0169 | CF0998 | Acyl-coenzyme A synthetase; EC 6.2.1.3. | ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V gamma; EC 3.1.11.5. | 0.985 |
aas | sga | CF0169 | CF0168 | Acyl-coenzyme A synthetase; EC 6.2.1.3. | Sn-glycerol-3-p acyltransferase. | 0.999 |
adc | pkn1 | CF0975 | CF0334 | Adenylate cyclase. | Serine/threonine-protein kinase; Together with the serine/threonine kinase Pkn1, may play a role in the specific interactions with host proteins during intracellular growth. | 0.709 |
adc | pkn2 | CF0975 | CF0386 | Adenylate cyclase. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.811 |
adc | pkn3 | CF0975 | CF0966 | Adenylate cyclase. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.878 |
adc | sga | CF0975 | CF0168 | Adenylate cyclase. | Sn-glycerol-3-p acyltransferase. | 0.616 |
csdB | pkn2 | CF0951 | CF0386 | Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.553 |
dnlJ | mhcA4 | CF0387 | CF0388 | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | Myosin heavy chain major plasmodial. | 0.522 |
dnlJ | pkn2 | CF0387 | CF0386 | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.862 |
mhcA4 | dnlJ | CF0388 | CF0387 | Myosin heavy chain major plasmodial. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.522 |
mhcA4 | pkn2 | CF0388 | CF0386 | Myosin heavy chain major plasmodial. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.548 |
pkn1 | adc | CF0334 | CF0975 | Serine/threonine-protein kinase; Together with the serine/threonine kinase Pkn1, may play a role in the specific interactions with host proteins during intracellular growth. | Adenylate cyclase. | 0.709 |
pkn1 | pkn2 | CF0334 | CF0386 | Serine/threonine-protein kinase; Together with the serine/threonine kinase Pkn1, may play a role in the specific interactions with host proteins during intracellular growth. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.788 |
pkn1 | pp2C | CF0334 | CF0608 | Serine/threonine-protein kinase; Together with the serine/threonine kinase Pkn1, may play a role in the specific interactions with host proteins during intracellular growth. | PP2C-like serine/threonine phosphatase; EC 3.1.3.16. | 0.901 |
pkn2 | aas | CF0386 | CF0169 | Serine/threonine protein kinase; EC 2.7.1.-. | Acyl-coenzyme A synthetase; EC 6.2.1.3. | 0.609 |
pkn2 | adc | CF0386 | CF0975 | Serine/threonine protein kinase; EC 2.7.1.-. | Adenylate cyclase. | 0.811 |
pkn2 | csdB | CF0386 | CF0951 | Serine/threonine protein kinase; EC 2.7.1.-. | Selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.553 |
pkn2 | dnlJ | CF0386 | CF0387 | Serine/threonine protein kinase; EC 2.7.1.-. | DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.862 |
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