Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CF0969 | adc | gene:10544809 | CF0975 | Conserved hypothetical protein. | Adenylate cyclase. | 0.574 |
CF0969 | ebp18 | gene:10544809 | CF0968 | Conserved hypothetical protein. | Hypothetical protein. | 0.913 |
CF0969 | fliI1 | gene:10544809 | CF0970 | Conserved hypothetical protein. | Type III secretory flagellar biosynthesis ATP synthase; EC 3.6.3.14. | 0.867 |
CF0969 | fliN | gene:10544809 | CF0967 | Conserved hypothetical protein. | Type III secretion flagellar motor switch domain. | 0.790 |
CF0969 | pkn3 | gene:10544809 | CF0966 | Conserved hypothetical protein. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.841 |
CF0969 | yscC | gene:10544809 | CF0965 | Conserved hypothetical protein. | Type III secretion general secretion pathway protein D. | 0.775 |
adc | CF0969 | CF0975 | gene:10544809 | Adenylate cyclase. | Conserved hypothetical protein. | 0.574 |
adc | ebp18 | CF0975 | CF0968 | Adenylate cyclase. | Hypothetical protein. | 0.527 |
adc | fliI1 | CF0975 | CF0970 | Adenylate cyclase. | Type III secretory flagellar biosynthesis ATP synthase; EC 3.6.3.14. | 0.778 |
adc | fliN | CF0975 | CF0967 | Adenylate cyclase. | Type III secretion flagellar motor switch domain. | 0.963 |
adc | pkn2 | CF0975 | CF0386 | Adenylate cyclase. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.811 |
adc | pkn3 | CF0975 | CF0966 | Adenylate cyclase. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.878 |
adc | yscC | CF0975 | CF0965 | Adenylate cyclase. | Type III secretion general secretion pathway protein D. | 0.903 |
ebp18 | CF0969 | CF0968 | gene:10544809 | Hypothetical protein. | Conserved hypothetical protein. | 0.913 |
ebp18 | adc | CF0968 | CF0975 | Hypothetical protein. | Adenylate cyclase. | 0.527 |
ebp18 | fliI1 | CF0968 | CF0970 | Hypothetical protein. | Type III secretory flagellar biosynthesis ATP synthase; EC 3.6.3.14. | 0.779 |
ebp18 | fliN | CF0968 | CF0967 | Hypothetical protein. | Type III secretion flagellar motor switch domain. | 0.820 |
ebp18 | pkn3 | CF0968 | CF0966 | Hypothetical protein. | Serine/threonine protein kinase; EC 2.7.1.-. | 0.803 |
ebp18 | yscC | CF0968 | CF0965 | Hypothetical protein. | Type III secretion general secretion pathway protein D. | 0.803 |
fliI1 | CF0969 | CF0970 | gene:10544809 | Type III secretory flagellar biosynthesis ATP synthase; EC 3.6.3.14. | Conserved hypothetical protein. | 0.867 |
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