STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FB00_08765Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. (312 aa)    
Predicted Functional Partners:
FB00_08760
5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 
 0.999
FB00_08755
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.971
FB00_08820
Allantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.859
FB00_08785
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
 
     0.797
FB00_02290
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.743
FB00_01260
Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.716
FB00_09925
FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.644
FB00_01250
8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.600
FB00_09935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.546
FB00_08805
Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.
 
     0.460
Your Current Organism:
Cellulosimicrobium funkei
NCBI taxonomy Id: 264251
Other names: ATCC BAA-886, C. funkei, CCUG 50705, Cellulosimicrobium funkei Brown et al. 2006, Cellulosimicrobium sp. AR6, Cellulosimicrobium sp. AR8, DSM 16025, JCM 14302, NBRC 104118, NCTC 13516, strain W6122
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