Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bd0663 | cheA | Bd0663 | Bd0578 | Chemotaxis protein; CDS. | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | 0.959 |
Bd0663 | cheA-2 | Bd0663 | Bd2406 | Chemotaxis protein; CDS. | Chemotaxis histidine kinase. | 0.959 |
Bd0663 | cheA-3 | Bd0663 | Bd3469 | Chemotaxis protein; CDS. | Chemotaxis protein. | 0.961 |
Bd0663 | cheB | Bd0663 | Bd0580 | Chemotaxis protein; CDS. | cheB, glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheD family. | 0.954 |
Bd0663 | cheB-2 | Bd0663 | Bd3467 | Chemotaxis protein; CDS. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.944 |
Bd0663 | cheD | Bd0663 | Bd2829 | Chemotaxis protein; CDS. | Chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.932 |
Bd0663 | cheR | Bd0663 | Bd2830 | Chemotaxis protein; CDS. | Chemotaxis protein methyltransferase; InterPro: CheR-type MCP methyl-transferase; hypothetical protein. | 0.932 |
Bd0663 | cheR-2 | Bd0663 | Bd3468 | Chemotaxis protein; CDS. | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.942 |
Bd0663 | cheW-2 | Bd0663 | Bd3471 | Chemotaxis protein; CDS. | InterPro: CheW-like domain; hypothetical protein. | 0.962 |
Bd0663 | cheW2 | Bd0663 | Bd2828 | Chemotaxis protein; CDS. | CheW2 protein; InterPro: CheW-like domain; hypothetical protein. | 0.956 |
cheA | Bd0663 | Bd0578 | Bd0663 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | Chemotaxis protein; CDS. | 0.959 |
cheA | cheA-2 | Bd0578 | Bd2406 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | Chemotaxis histidine kinase. | 0.943 |
cheA | cheA-3 | Bd0578 | Bd3469 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | Chemotaxis protein. | 0.937 |
cheA | cheB | Bd0578 | Bd0580 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | cheB, glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheD family. | 0.999 |
cheA | cheB-2 | Bd0578 | Bd3467 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
cheA | cheD | Bd0578 | Bd2829 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | Chemotaxis protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.761 |
cheA | cheR | Bd0578 | Bd2830 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | Chemotaxis protein methyltransferase; InterPro: CheR-type MCP methyl-transferase; hypothetical protein. | 0.960 |
cheA | cheR-2 | Bd0578 | Bd3468 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | Chemotaxis protein methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.960 |
cheA | cheW-2 | Bd0578 | Bd3471 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | InterPro: CheW-like domain; hypothetical protein. | 0.998 |
cheA | cheW2 | Bd0578 | Bd2828 | InterPro: Histidine kinase- DNA gyrase B-phytochrome-like ATPase; hypothetical protein. | CheW2 protein; InterPro: CheW-like domain; hypothetical protein. | 0.988 |
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