STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd0742Sensory box/GGDEF domain protein, InterPro: Domain of unknown function DUF9; hypothetical protein. (320 aa)    
Predicted Functional Partners:
Bd1971
Hypothetical protein; FOG: EAL domain.
 
 0.997
Bd2421
Putative integral membrane protein containing HD domain; InterPro: Metal dependent phosphohydrolase HD domain,; hypothetical protein.
 
 0.976
Bd3528
InterPro: Histidine kinase C-terminal; hypothetical protein.
 
 0.918
Bd3430
InterPro: Histidine kinase C-terminal; hypothetical protein.
  
 0.907
pgi
InterPro: Phosphoglucose isomerase (PGI); hypothetical protein.
 
  
 0.833
Bd2325
HD-GYP hydrolase domain containing protein.
 
 0.821
Bd1828
InterPro: Histidine kinase C-terminal; hypothetical protein.
 
 0.820
fliN
Flagellar motor switch protein FliN.
  
 
 0.819
Bd3613
Sensory transduction histidine kinase; hypothetical protein.
 
 0.818
Bd1381
Two-component hybrid sensor and regulator; InterPro: Histidine kinase C-terminal; hypothetical protein.
 
 0.817
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (30%) [HD]