STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd1168Conserved hypothetical protein. (301 aa)    
Predicted Functional Partners:
Bd1169
Large Ala/Glu-rich protein; Also similar Myosin heavy chain, skeletal muscle; hypothetical protein.
       0.788
Bd1167
Microtubule binding protein; InterPro: Phosphoglucomutase and phosphomannomutase family, microtubule binding protein D-CLIP-190 - fruit fly; hypothetical protein.
       0.773
Bd0416
Hypothetical abductin-like protein; Similarity to adventurous gliding motility protein X, putative adventurous gliding motility locus; hypothetical protein.
      
 0.552
Bd0659
Hypothetical protein predicted by Glimmer/Critica; CDS.
      
 0.552
Bd1904
Hypothetical protein predicted by Glimmer/Critica.
      
 0.552
dps
Putative DNA protection during starvation or oxydative stress transcription regulator protein; InterPro: Dps protein family,; hypothetical protein; Belongs to the Dps family.
      
 0.552
sdhB
InterPro: Ferredoxin, succinate dehydrogenase subunit B, succinate dehydrogenase, iron-sulfur protein; hypothetical protein.
      
 0.551
narL
InterPro: Response regulator receiver domain; hypothetical protein.
      
 0.551
Bd1166
Hypothetical protein predicted by Glimmer/Critica.
       0.538
Bd1476
Hypothetical abductin-like protein, adventurous gliding motility locus; hypothetical protein.
      
 0.509
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.