node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bd1395 | dbpA | Bd1395 | Bd1394 | S1 RNA binding domain; hypothetical protein; Belongs to the CvfB family. | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 0.591 |
atpB-2 | dbpA | Bd3897 | Bd1394 | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 0.576 |
atpB-2 | pnp | Bd3897 | Bd1551 | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.497 |
atpB-2 | rplC | Bd3897 | Bd2976 | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.690 |
atpB-2 | rplD | Bd3897 | Bd2975 | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.786 |
atpB-2 | rplM | Bd3897 | Bd0492 | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.513 |
atpB-2 | rplO | Bd3897 | Bd2956 | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.793 |
atpB-2 | rplX | Bd3897 | Bd0941 | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.740 |
dbpA | Bd1395 | Bd1394 | Bd1395 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | S1 RNA binding domain; hypothetical protein; Belongs to the CvfB family. | 0.591 |
dbpA | atpB-2 | Bd1394 | Bd3897 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. | 0.576 |
dbpA | hrpB | Bd1394 | Bd3108 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | Helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 0.618 |
dbpA | pnp | Bd1394 | Bd1551 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.795 |
dbpA | ppiA | Bd1394 | Bd0177 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.653 |
dbpA | rplC | Bd1394 | Bd2976 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.735 |
dbpA | rplD | Bd1394 | Bd2975 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.649 |
dbpA | rplM | Bd1394 | Bd0492 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.641 |
dbpA | rplO | Bd1394 | Bd2956 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.577 |
dbpA | rplX | Bd1394 | Bd0941 | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 50S ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.611 |
hrpB | dbpA | Bd3108 | Bd1394 | Helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | ATP-dependent RNA helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | 0.618 |
hrpB | ppiA | Bd3108 | Bd0177 | Helicase; InterPro: DEAD/DEAH box helicase; hypothetical protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.890 |