Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bd1607 | Bd1609 | Bd1607 | Bd1609 | Cytochrome c3. | Molybdopterin oxidoreductase. | 0.986 |
Bd1607 | Bd1610 | Bd1607 | Bd1610 | Cytochrome c3. | Conserved hypothetical protein; ABC-type Fe3+ transport system permease component. | 0.966 |
Bd1607 | Bd1611 | Bd1607 | Bd1611 | Cytochrome c3. | Similar to cytochrome c; hypothetical protein. | 0.966 |
Bd1607 | Bd1612 | Bd1607 | Bd1612 | Cytochrome c3. | Putative molybdopterin oxidoreductase. | 0.976 |
Bd1607 | hmoA | Bd1607 | Bd1608 | Cytochrome c3. | Molybdopterin oxidoreductase, iron-sulfur binding subunit. | 0.994 |
Bd1607 | nuoD | Bd1607 | Bd3085 | Cytochrome c3. | NADH dehydrogenase I,D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.875 |
Bd1609 | Bd1607 | Bd1609 | Bd1607 | Molybdopterin oxidoreductase. | Cytochrome c3. | 0.986 |
Bd1609 | Bd1610 | Bd1609 | Bd1610 | Molybdopterin oxidoreductase. | Conserved hypothetical protein; ABC-type Fe3+ transport system permease component. | 0.983 |
Bd1609 | Bd1611 | Bd1609 | Bd1611 | Molybdopterin oxidoreductase. | Similar to cytochrome c; hypothetical protein. | 0.983 |
Bd1609 | Bd1612 | Bd1609 | Bd1612 | Molybdopterin oxidoreductase. | Putative molybdopterin oxidoreductase. | 0.971 |
Bd1609 | hmoA | Bd1609 | Bd1608 | Molybdopterin oxidoreductase. | Molybdopterin oxidoreductase, iron-sulfur binding subunit. | 0.999 |
Bd1610 | Bd1607 | Bd1610 | Bd1607 | Conserved hypothetical protein; ABC-type Fe3+ transport system permease component. | Cytochrome c3. | 0.966 |
Bd1610 | Bd1609 | Bd1610 | Bd1609 | Conserved hypothetical protein; ABC-type Fe3+ transport system permease component. | Molybdopterin oxidoreductase. | 0.983 |
Bd1610 | Bd1611 | Bd1610 | Bd1611 | Conserved hypothetical protein; ABC-type Fe3+ transport system permease component. | Similar to cytochrome c; hypothetical protein. | 0.982 |
Bd1610 | Bd1612 | Bd1610 | Bd1612 | Conserved hypothetical protein; ABC-type Fe3+ transport system permease component. | Putative molybdopterin oxidoreductase. | 0.979 |
Bd1610 | hmoA | Bd1610 | Bd1608 | Conserved hypothetical protein; ABC-type Fe3+ transport system permease component. | Molybdopterin oxidoreductase, iron-sulfur binding subunit. | 0.996 |
Bd1611 | Bd1607 | Bd1611 | Bd1607 | Similar to cytochrome c; hypothetical protein. | Cytochrome c3. | 0.966 |
Bd1611 | Bd1609 | Bd1611 | Bd1609 | Similar to cytochrome c; hypothetical protein. | Molybdopterin oxidoreductase. | 0.983 |
Bd1611 | Bd1610 | Bd1611 | Bd1610 | Similar to cytochrome c; hypothetical protein. | Conserved hypothetical protein; ABC-type Fe3+ transport system permease component. | 0.982 |
Bd1611 | Bd1612 | Bd1611 | Bd1612 | Similar to cytochrome c; hypothetical protein. | Putative molybdopterin oxidoreductase. | 0.979 |
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