STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd1879ABC-type transporter ATP-binding protein or permease protein; hypothetical protein. (358 aa)    
Predicted Functional Partners:
Bd1876
ABC-type multidrug transport system, ATPase component; InterPro: ABC transporter, AAA ATPase superfamily; hypothetical protein.
  
 0.996
Bd1877
ABC transporter multidrug ATP-binding protein; InterPro: AAA ATPase superfamily; hypothetical protein.
  
 0.996
nodI
NodI membrane transport protein, Nod factor export ATP-binding protein I, probable Daunorubicin resistance ATP-binding protein; hypothetical protein.
  
 0.951
Bd1875
Putative protein secretion protein, HlyD family.
 
     0.948
gldA
ABC- type transport system involved in gliding motility, ATP-binding protein; hypothetical protein.
 
  
 0.938
phnC
Phosphonates transport ATP-binding protein; hypothetical protein.
 
  
 0.937
yvfR
ABC transporter, ATP-binding protein; InterPro: AAA ATPase superfamily; hypothetical protein.
 
  
 0.937
yadG
Putative ATP-binding component of a transport system; InterPro: AAA ATPase superfamily; hypothetical protein.
 
  
 0.931
drrA
Daunorubicin resistance, ATP-binding protein; hypothetical protein.
     0.915
Bd3806
ABC-type organic solvent resistance transport system ATP-binding protein.
      0.900
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.