STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bd2332InterPro: Serine proteases trypsin family; hypothetical protein. (313 aa)    
Predicted Functional Partners:
Bd2334
InterPro: Serine proteases trypsin family; hypothetical protein.
 
   
 0.860
spb1
InterPro: Serine proteases subtilase family,; hypothetical protein.
     
 0.648
Bd0976
Superfamily II DNA/RNA helicases, SNF2 family; hypothetical protein.
   
  
 0.633
Bd1399
Hypothetical protein predicted by Glimmer/Critica.
      
 0.630
Bd1673
Putative cyclic beta-1,2-glucan modification protein.
      
 0.630
Bd3162
InterPro: DAG-kinase catalytic domain (presumed); hypothetical protein.
      
 0.630
Bd1358
Putative periplasmic protein; hypothetical protein.
      
 0.627
Bd0056
Conserved hypothetical protein.
  
     0.604
cpt
InterPro: Zinc carboxypeptidases carboxypeptidase A metalloprotease (M14) family; hypothetical protein.
  
 
 
 0.601
Bd3223
InterPro: SCO1/SenC, Sco1-related protein; hypothetical protein.
    
 
 0.565
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.