STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpCAlkyl hydroperoxide reductase, C22 subunit; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (188 aa)    
Predicted Functional Partners:
ahpF
Alkyl hydroperoxide reductase, subunit F; InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein.
 
  
 0.973
trxB
Thioredoxin reductase; InterPro: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; hypothetical protein.
  
 
 0.873
resA-2
Cytochrome c biogenesis (thioredoxin) related protein; InterPro: Thioredoxin; hypothetical protein.
  
 0.798
resA-3
Thiol:disulfide interchange protein tlpA; InterPro: Thioredoxin, thioredoxin related protein resA; hypothetical protein.
  
 0.798
Bd2839
Hypothetical protein predicted by Glimmer/Critica.
  
 
 0.762
catA
Catalase; InterPro: Catalase; hypothetical protein; Belongs to the catalase family.
  
 
 0.723
katA
KatA protein; InterPro: Catalase, Catalase isozyme 1; hypothetical protein.
  
 
 0.723
fur
InterPro: Ferric uptake regulator family; hypothetical protein; Belongs to the Fur family.
  
  
 0.697
fur-2
InterPro: Ferric uptake regulator family; hypothetical protein; Belongs to the Fur family.
  
  
 0.652
grpE
GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]
   
 
 0.638
Your Current Organism:
Bdellovibrio bacteriovorus HD100
NCBI taxonomy Id: 264462
Other names: B. bacteriovorus HD100, Bdellovibrio bacteriovorus DSM 50701, Bdellovibrio bacteriovorus str. HD100, Bdellovibrio bacteriovorus strain HD100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.