STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Moth_0165dTDP-4-dehydrorhamnose 3,5-epimerase related protein. (151 aa)    
Predicted Functional Partners:
Moth_0163
NAD-dependent epimerase/dehydratase.
 
 
 0.996
Moth_1925
Nucleotidyltransferase.
  
 0.940
Moth_0669
Undecaprenyl-phosphate galactosephosphotransferase.
 
 
 0.939
Moth_0757
Nucleotidyl transferase.
  
 0.885
Moth_0751
NAD-dependent epimerase/dehydratase.
  
 
 0.832
Moth_0752
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.822
Moth_1589
NAD-dependent epimerase/dehydratase.
  
 
 0.759
Moth_0673
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.689
Moth_1365
Glycosyl transferase, group 1.
 
  
 0.588
Moth_1253
O-antigen polymerase.
  
  
 0.554
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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