STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Moth_0739Polysaccharide deacetylase. (324 aa)    
Predicted Functional Partners:
Moth_2154
Glycosyl transferase, family 2.
 
 0.974
Moth_0063
Glycoside hydrolase, family 18.
 
    
 0.903
Moth_1271
Peptidoglycan-binding LysM.
 
    
 0.823
Moth_1831
Glycosyltransferase; Probably involved in cell wall biogenesis.
  
 
 0.709
Moth_0738
Peptidase M1, membrane alanine aminopeptidase.
  
    0.624
Moth_1867
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.410
Your Current Organism:
Moorella thermoacetica
NCBI taxonomy Id: 264732
Other names: M. thermoacetica ATCC 39073, Moorella thermoacetica ATCC 39073, Moorella thermoacetica str. ATCC 39073, Moorella thermoacetica strain ATCC 39073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.