STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A443HN48Putative flavin-containing amine oxidase. (1123 aa)    
Predicted Functional Partners:
A0A443HTJ1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.936
A0A443I344
Histone deacetylase RpdA/Rpd3.
   
 0.936
A0A443I8F0
Putative chromatin assembly factor 1 subunit C.
   
 0.885
A0A443HJT5
Histone H3; Belongs to the histone H3 family.
    
 0.871
A0A443HM50
Histone H3.
    
 0.871
A0A443HTV6
Vacuolar sorting protein; Belongs to the STXBP/unc-18/SEC1 family.
 
   
  0.870
A0A443HLL1
Putative chromatin remodeling complex subunit.
   
 0.861
A0A443HTV3
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.827
A0A443I3Y7
Histone H2B; Belongs to the histone H2B family.
    
 0.802
A0A443HTM6
Tryptophan synthase.
     
 0.760
Your Current Organism:
Byssochlamys spectabilis
NCBI taxonomy Id: 264951
Other names: ATCC 90900, B. spectabilis, Byssochlamys spectabilis (Udagawa & Shoji Suzuki) Houbraken & Samson 2008, CBS 101075, FRR 5219, JCM 12815, Pacilomyces variotii, Paecilomyces spectabilis, Paecilomyces variotii, Paecilomyces variotti, Paecilomyces vatiotii, Talaromyces spectabilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.