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Mfla_0142 protein (Methylobacillus flagellatus) - STRING interaction network
"Mfla_0142" - Sigma-54 in Methylobacillus flagellatus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfla_0142Sigma-54 (RpoN); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (488 aa)    
Predicted Functional Partners:
Mfla_0214
Two component, sigma54 specific, Fis family transcriptional regulator (455 aa)
 
   
  0.984
Mfla_0911
Two component, sigma54 specific, Fis family transcriptional regulator (456 aa)
 
   
  0.982
Mfla_0911
Two component, sigma54 specific, Fis family transcriptional regulator (456 aa)
 
   
  0.982
Mfla_1567
Sigma-54 factor, interaction region (381 aa)
 
 
 
  0.957
Mfla_1815
Sigma-54 dependent trancsriptional regulator (433 aa)
 
     
  0.926
Mfla_2450
Nitrogen metabolism transcriptional regulator, NtrC, Fis family (462 aa)
 
     
  0.925
Mfla_0074
Two component, sigma54 specific, Fis family transcriptional regulator (483 aa)
 
     
  0.925
Mfla_1254
Two component, sigma54 specific, Fis family transcriptional regulator (472 aa)
 
     
  0.924
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (328 aa)
       
 
  0.879
Mfla_0143
SSU ribosomal protein S30P / sigma 54 modulation protein (108 aa)
 
   
  0.877
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus, M. flagellatus KT, Methylobacillus, Methylobacillus flagellatus, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
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