STRINGSTRING
Mfla_0217 protein (Methylobacillus flagellatus) - STRING interaction network
"Mfla_0217" - RNA polymerase factor sigma-70 in Methylobacillus flagellatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfla_0217RNA polymerase factor sigma-70 (196 aa)    
Predicted Functional Partners:
Mfla_0219
Hypothetical protein (144 aa)
 
          0.972
Mfla_0218
Transmembrane protein (122 aa)
              0.859
Mfla_1352
FecR (348 aa)
 
 
  0.780
Mfla_2680
FecR (320 aa)
   
 
  0.749
Mfla_0214
Two component, sigma54 specific, Fis family transcriptional regulator (455 aa)
         
  0.676
Mfla_0216
Hypothetical protein (117 aa)
              0.662
Mfla_0215
Signal transduction histidine kinase (531 aa)
              0.662
Mfla_0213
N-acetyl-anhydromuranmyl-L-alanine amidase (194 aa)
              0.662
Mfla_0858
Sigma E regulatory protein, MucB/RseB (316 aa)
   
 
  0.655
Mfla_0858
Sigma E regulatory protein, MucB/RseB (316 aa)
   
 
  0.655
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus, M. flagellatus KT, Methylobacillus, Methylobacillus flagellatus, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
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