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greA protein (Methylobacillus flagellatus) - STRING interaction network
"greA" - GreA/GreB family elongation factor in Methylobacillus flagellatus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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greAGreA/GreB family elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (158 aa)    
Predicted Functional Partners:
Mfla_0781
Hypothetical protein (151 aa)
              0.871
Mfla_0779
Carbamoyl-phosphate synthase large subunit (1068 aa)
     
 
  0.797
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (328 aa)
 
 
 
  0.772
rpoH
Sigma 32 (RpoH) (285 aa)
 
   
  0.733
carA
Carbamoyl-phosphate synthase small subunit (376 aa)
         
  0.733
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis (270 aa)
     
 
  0.726
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (70 aa)
 
 
  0.712
nusA
Transcription elongation factor NusA; Participates in both transcription termination and antitermination (488 aa)
 
 
 
  0.699
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1390 aa)
   
 
 
  0.697
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1409 aa)
       
 
  0.696
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus, M. flagellatus KT, Methylobacillus, Methylobacillus flagellatus, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
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