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Mfla_0858 protein (Methylobacillus flagellatus) - STRING interaction network
"Mfla_0858" - Sigma E regulatory protein, MucB/RseB in Methylobacillus flagellatus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfla_0858Sigma E regulatory protein, MucB/RseB (316 aa)    
Predicted Functional Partners:
Mfla_0856
RNA polymerase sigma factor RpoE (205 aa)
 
 
  0.988
Mfla_0856
RNA polymerase sigma factor RpoE (205 aa)
 
 
  0.920
Mfla_0857
Hypothetical protein (152 aa)
 
          0.894
Mfla_0859
Peptidase S1C, Do (477 aa)
   
   
  0.764
Mfla_0855
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (538 aa)
         
  0.740
Mfla_0217
RNA polymerase factor sigma-70 (196 aa)
   
 
  0.655
Mfla_0861
Signal peptidase I (248 aa)
   
        0.600
lepA1
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (597 aa)
   
        0.600
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (296 aa)
   
        0.590
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (248 aa)
              0.583
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus, M. flagellatus KT, Methylobacillus, Methylobacillus flagellatus, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
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