Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mfla_0386 | Mfla_1436 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase. | 0.533 |
Mfla_0386 | Mfla_1441 | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Glutathione-independent formaldehyde dehydrogenase. | 0.417 |
Mfla_0673 | Mfla_1436 | Conserved hypothetical protein. | Catalase. | 0.483 |
Mfla_0673 | Mfla_1441 | Conserved hypothetical protein. | Glutathione-independent formaldehyde dehydrogenase. | 0.431 |
Mfla_1431 | Mfla_1432 | Hypothetical protein. | Cytochrome c, class I. | 0.773 |
Mfla_1431 | Mfla_1433 | Hypothetical protein. | Cytochrome C oxidase, mono-heme subunit/FixO. | 0.773 |
Mfla_1431 | Mfla_1434 | Hypothetical protein. | Cytochrome c oxidase, subunit I. | 0.773 |
Mfla_1431 | Mfla_1435 | Hypothetical protein. | Hypothetical protein. | 0.773 |
Mfla_1431 | Mfla_1436 | Hypothetical protein. | Catalase. | 0.470 |
Mfla_1432 | Mfla_1431 | Cytochrome c, class I. | Hypothetical protein. | 0.773 |
Mfla_1432 | Mfla_1433 | Cytochrome c, class I. | Cytochrome C oxidase, mono-heme subunit/FixO. | 0.969 |
Mfla_1432 | Mfla_1434 | Cytochrome c, class I. | Cytochrome c oxidase, subunit I. | 0.969 |
Mfla_1432 | Mfla_1435 | Cytochrome c, class I. | Hypothetical protein. | 0.782 |
Mfla_1432 | Mfla_1436 | Cytochrome c, class I. | Catalase. | 0.470 |
Mfla_1433 | Mfla_1431 | Cytochrome C oxidase, mono-heme subunit/FixO. | Hypothetical protein. | 0.773 |
Mfla_1433 | Mfla_1432 | Cytochrome C oxidase, mono-heme subunit/FixO. | Cytochrome c, class I. | 0.969 |
Mfla_1433 | Mfla_1434 | Cytochrome C oxidase, mono-heme subunit/FixO. | Cytochrome c oxidase, subunit I. | 0.999 |
Mfla_1433 | Mfla_1435 | Cytochrome C oxidase, mono-heme subunit/FixO. | Hypothetical protein. | 0.799 |
Mfla_1433 | Mfla_1436 | Cytochrome C oxidase, mono-heme subunit/FixO. | Catalase. | 0.470 |
Mfla_1434 | Mfla_1431 | Cytochrome c oxidase, subunit I. | Hypothetical protein. | 0.773 |
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