STRINGSTRING
rnhA protein (Methylobacillus flagellatus) - STRING interaction network
"rnhA" - RNase HI in Methylobacillus flagellatus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnhARNase HI; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (151 aa)    
Predicted Functional Partners:
Mfla_1478
DNA polymerase III, epsilon subunit (231 aa)
 
   
  0.978
Mfla_1480
Methyltransferase type 11 (240 aa)
     
 
  0.909
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid (250 aa)
         
  0.790
Mfla_0358
DNA polymerase I (910 aa)
 
 
  0.777
hemL
Glutamate-1-semialdehyde aminotransferase (428 aa)
 
            0.738
rnhB
RNase HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (193 aa)
     
 
  0.734
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (470 aa)
       
 
  0.731
Mfla_2424
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (167 aa)
     
 
  0.689
Mfla_1482
Lytic transglycosylase, catalytic (518 aa)
     
      0.678
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (526 aa)
   
   
  0.643
Your Current Organism:
Methylobacillus flagellatus
NCBI taxonomy Id: 265072
Other names: M. flagellatus, M. flagellatus KT, Methylobacillus, Methylobacillus flagellatus, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT
Server load: low (7%) [HD]