Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
YVTN beta-propeller repeat-containing protein (320 aa)
Predicted Functional Partners:
MxaD gene product (176 aa)
Pyrrolo-quinoline quinone (623 aa)
Pyrrolo-quinoline quinone (625 aa)
Pyrrolo-quinoline quinone (620 aa)
Beta-lactamase-like protein (314 aa)
Pyrrolo-quinoline quinone (616 aa)
Extracellular solute-binding protein (305 aa)
Pyrrolo-quinoline quinone (599 aa)
Hypothetical protein (264 aa)
Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5’-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage (172 aa)
Your Current Organism:
NCBI taxonomy Id: 265072 Other names: M. flagellatus, M. flagellatus KT, Methylobacillus, Methylobacillus flagellatus, Methylobacillus flagellatus KT, Methylobacillus flagellatus str. KT, Methylobacillus flagellatus strain KT