STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfl028Unknown protein. (105 aa)    
Predicted Functional Partners:
Mfl029
tRNA dihydrouridine synthetase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.778
lysS
Lysyl tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.778
Mfl026
Sn-glycerol-3-phosphate ABC transporter permease component.
       0.513
Mfl027
DNA uptake protein.
       0.513
Mfl024
Sn-glycerol-3-phosphate ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
       0.510
Mfl025
Sn-glycerol-3-phosphate ABC transporter permease component.
       0.510
Mfl023
Sn-glycerol-3-phosphate ABC transporter periplasmic binding component.
       0.448
Your Current Organism:
Mesoplasma florum
NCBI taxonomy Id: 265311
Other names: M. florum L1, Mesoplasma florum L1, Mesoplasma florum str. L1, Mesoplasma florum strain L1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.