STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfl283Riboflavin kinase/FAD synthase. (189 aa)    
Predicted Functional Partners:
Mfl334
Riboflavin kinase.
     
  0.900
truB
tRNA pseudouridine 5S synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
  
 0.861
Mfl281
dephospho-CoA kinase; Belongs to the CoaE family.
  
  
 0.721
rpsO
30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
  
  
 0.618
Mfl280
Unknown protein.
       0.603
Mfl279
Unknown protein.
       0.547
Mfl278
Guanosine-3', 5'-bis(diphosphate)3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
    0.470
Mfl196
tRNA and rRNA cytosine-C5-methylases; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
  
 0.462
Mfl275
Protein-export membrane protein.
  
  
 0.435
Mfl287
Probable membrane associated Zn-dependent protease.
  
    0.428
Your Current Organism:
Mesoplasma florum
NCBI taxonomy Id: 265311
Other names: M. florum L1, Mesoplasma florum L1, Mesoplasma florum str. L1, Mesoplasma florum strain L1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.