Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mfl002 | Mfl007 | Mfl002 | Mfl007 | DNA polymerase III, beta chain. | DNA gyrase subunit A. | 0.559 |
Mfl002 | Mfl309 | Mfl002 | Mfl309 | DNA polymerase III, beta chain. | DNA topoisomerase IV subunit B. | 0.632 |
Mfl002 | pheT | Mfl002 | Mfl398 | DNA polymerase III, beta chain. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.543 |
Mfl002 | polA | Mfl002 | Mfl582 | DNA polymerase III, beta chain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
Mfl007 | Mfl002 | Mfl007 | Mfl002 | DNA gyrase subunit A. | DNA polymerase III, beta chain. | 0.559 |
Mfl007 | Mfl309 | Mfl007 | Mfl309 | DNA gyrase subunit A. | DNA topoisomerase IV subunit B. | 0.992 |
Mfl007 | pheT | Mfl007 | Mfl398 | DNA gyrase subunit A. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.526 |
Mfl007 | polA | Mfl007 | Mfl582 | DNA gyrase subunit A. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.507 |
Mfl308 | Mfl309 | Mfl308 | Mfl309 | Modification methylase Sau3AI (GATC cytosine-specific methyltransferase). | DNA topoisomerase IV subunit B. | 0.786 |
Mfl308 | Mfl311 | Mfl308 | Mfl311 | Modification methylase Sau3AI (GATC cytosine-specific methyltransferase). | Putative transcriptional regulator. | 0.706 |
Mfl308 | parC | Mfl308 | Mfl310 | Modification methylase Sau3AI (GATC cytosine-specific methyltransferase). | DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. | 0.723 |
Mfl309 | Mfl002 | Mfl309 | Mfl002 | DNA topoisomerase IV subunit B. | DNA polymerase III, beta chain. | 0.632 |
Mfl309 | Mfl007 | Mfl309 | Mfl007 | DNA topoisomerase IV subunit B. | DNA gyrase subunit A. | 0.992 |
Mfl309 | Mfl308 | Mfl309 | Mfl308 | DNA topoisomerase IV subunit B. | Modification methylase Sau3AI (GATC cytosine-specific methyltransferase). | 0.786 |
Mfl309 | Mfl311 | Mfl309 | Mfl311 | DNA topoisomerase IV subunit B. | Putative transcriptional regulator. | 0.721 |
Mfl309 | Mfl462 | Mfl309 | Mfl462 | DNA topoisomerase IV subunit B. | Putative multidrug ABC transporter ATP-binding component. | 0.626 |
Mfl309 | parC | Mfl309 | Mfl310 | DNA topoisomerase IV subunit B. | DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. | 0.986 |
Mfl309 | pheT | Mfl309 | Mfl398 | DNA topoisomerase IV subunit B. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.599 |
Mfl309 | polA | Mfl309 | Mfl582 | DNA topoisomerase IV subunit B. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.613 |
Mfl309 | smc | Mfl309 | Mfl232 | DNA topoisomerase IV subunit B. | Structural maintenance of chromosomes smc superfamily protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.619 |
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