Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mfl427 | Mfl428 | Mfl427 | Mfl428 | Predicted chromosome segregation ATPase. | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | 0.440 |
Mfl427 | Mfl429 | Mfl427 | Mfl429 | Predicted chromosome segregation ATPase. | Unknown protein. | 0.440 |
Mfl428 | Mfl427 | Mfl428 | Mfl427 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | Predicted chromosome segregation ATPase. | 0.440 |
Mfl428 | Mfl429 | Mfl428 | Mfl429 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | Unknown protein. | 0.773 |
Mfl428 | Mfl430 | Mfl428 | Mfl430 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | 0.520 |
Mfl428 | Mfl431 | Mfl428 | Mfl431 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | Trehalose/sucrose/beta-glucoside PTS system IIBC component. | 0.552 |
Mfl428 | Mfl501 | Mfl428 | Mfl501 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | Trehalose operon repressor, repressor of treA,B,C. | 0.565 |
Mfl428 | dnaA | Mfl428 | Mfl001 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. | 0.507 |
Mfl428 | polA | Mfl428 | Mfl582 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.422 |
Mfl428 | rpsF | Mfl428 | Mfl080 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.498 |
Mfl428 | topA | Mfl428 | Mfl654 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.481 |
Mfl428 | tuf | Mfl428 | Mfl621 | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.462 |
Mfl429 | Mfl427 | Mfl429 | Mfl427 | Unknown protein. | Predicted chromosome segregation ATPase. | 0.440 |
Mfl429 | Mfl428 | Mfl429 | Mfl428 | Unknown protein. | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | 0.773 |
Mfl429 | Mfl430 | Mfl429 | Mfl430 | Unknown protein. | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | 0.516 |
Mfl429 | Mfl431 | Mfl429 | Mfl431 | Unknown protein. | Trehalose/sucrose/beta-glucoside PTS system IIBC component. | 0.516 |
Mfl430 | Mfl428 | Mfl430 | Mfl428 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | 0.520 |
Mfl430 | Mfl429 | Mfl430 | Mfl429 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Unknown protein. | 0.516 |
Mfl430 | Mfl431 | Mfl430 | Mfl431 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Trehalose/sucrose/beta-glucoside PTS system IIBC component. | 0.796 |
Mfl431 | Mfl428 | Mfl431 | Mfl428 | Trehalose/sucrose/beta-glucoside PTS system IIBC component. | Predicted histone-like DNA-binding protein; Belongs to the bacterial histone-like protein family. | 0.552 |
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