STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfl494Putative glycoprotein endopeptidase. (188 aa)    
Predicted Functional Partners:
tsaD
Glycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.993
Mfl495
Conserved hypothetical protein, ATPase.
  
 
 0.980
Mfl496
Mg2+ transport ATPase.
     
 0.654
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
       0.601
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.601
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.513
guaA
GMP synthase (glutamine hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.509
Mfl488
Exopolyphosphatase-like.
  
 
 0.500
recR
Recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
   
 
 0.449
Mfl679
Cytosine deaminase.
  
  
 0.434
Your Current Organism:
Mesoplasma florum
NCBI taxonomy Id: 265311
Other names: M. florum L1, Mesoplasma florum L1, Mesoplasma florum str. L1, Mesoplasma florum strain L1
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