STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rxyl_0024PFAM: protein phosphatase 2C-like; KEGG: ade:Adeh_3691 serine/threonine phosphatase. (381 aa)    
Predicted Functional Partners:
Rxyl_0021
PFAM: protein kinase PASTA; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: tte:TTE1500 serine/threonine protein kinase.
 
 0.999
Rxyl_0025
FHA domain containing protein; PFAM: Forkhead-associated; KEGG: fra:Francci3_4431 FHA domain containing protein.
 
 
 0.976
Rxyl_0026
PFAM: Forkhead-associated; KEGG: tfu:Tfu_3060 FHA domain protein.
 
 
 0.967
Rxyl_0027
PFAM: protein kinase; SMART: Tyrosine protein kinase Serine/threonine protein kinase; KEGG: nfa:nfa31920 putative serine/threonine protein kinase.
 
 0.967
Rxyl_0022
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; KEGG: tte:TTE1967 cell division protein FtsI/penicillin-binding protein 2.
  
  
 0.904
Rxyl_0023
PFAM: cell cycle protein; KEGG: mbo:Mb0017c probable cell division protein RodA; Belongs to the SEDS family.
 
  
 0.898
Rxyl_0730
PFAM: protein kinase tyrosine protein kinase; SMART: Serine/threonine protein kinase; KEGG: sth:STH1353 serine/threonine protein kinase.
 
 0.887
Rxyl_0496
PFAM: protein kinase tyrosine protein kinase; SMART: Serine/threonine protein kinase; KEGG: sth:STH1353 serine/threonine protein kinase.
 
 0.885
Rxyl_0943
PFAM: protein kinase tyrosine protein kinase; SMART: Serine/threonine protein kinase; KEGG: mta:Moth_0912 serine/threonine protein kinase.
 
 0.881
Rxyl_0729
PFAM: protein kinase tyrosine protein kinase; SMART: Serine/threonine protein kinase; KEGG: sth:STH1353 serine/threonine protein kinase.
 
 0.873
Your Current Organism:
Rubrobacter xylanophilus
NCBI taxonomy Id: 266117
Other names: R. xylanophilus DSM 9941, Rubrobacter xylanophilus DSM 9941, Rubrobacter xylanophilus str. DSM 9941, Rubrobacter xylanophilus strain DSM 9941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.