STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rxyl_0943PFAM: protein kinase tyrosine protein kinase; SMART: Serine/threonine protein kinase; KEGG: mta:Moth_0912 serine/threonine protein kinase. (468 aa)    
Predicted Functional Partners:
Rxyl_1434
FHA domain containing protein; PFAM: Forkhead-associated; KEGG: sco:SCO1384 hypothetical protein.
 
 
 
 0.925
Rxyl_0024
PFAM: protein phosphatase 2C-like; KEGG: ade:Adeh_3691 serine/threonine phosphatase.
 
 0.881
Rxyl_0025
FHA domain containing protein; PFAM: Forkhead-associated; KEGG: fra:Francci3_4431 FHA domain containing protein.
 
 
 
 0.716
Rxyl_0026
PFAM: Forkhead-associated; KEGG: tfu:Tfu_3060 FHA domain protein.
 
 
 
 0.712
Rxyl_0944
PFAM: thiamine pyrophosphate enzyme-like TPP-binding thiamine pyrophosphate enzyme, central region thiamine pyrophosphate enzyme-like TPP binding region; KEGG: rpa:RPA1609 benzoylformate decarboxylase; Belongs to the TPP enzyme family.
       0.578
Rxyl_0945
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI periplasmic binding protein/LacI transcriptional regulator; KEGG: sma:SAV5320 putative LacI-family transcriptional regulator.
     
 0.539
Rxyl_0942
PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: tth:TTC1833 quinone oxidoreductase.
       0.529
Rxyl_0941
PFAM: luciferase-like; KEGG: mbo:Mb1395 probable oxidoreductase.
  
    0.528
rbsA1
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
       0.525
Rxyl_0947
PFAM: inner-membrane translocator; KEGG: sco:SCO2747 bifunctional carbohydrate binding and transport protein; Belongs to the binding-protein-dependent transport system permease family.
       0.525
Your Current Organism:
Rubrobacter xylanophilus
NCBI taxonomy Id: 266117
Other names: R. xylanophilus DSM 9941, Rubrobacter xylanophilus DSM 9941, Rubrobacter xylanophilus str. DSM 9941, Rubrobacter xylanophilus strain DSM 9941
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