rpsT protein (Rubrobacter xylanophilus) - STRING interaction network

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rpsT

SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. (84 aa)

Predicted Functional Partners:

rpmB

0.997

rpmF

0.996

rplU

0.996

rplM

0.996

rpsP

0.990

rpsO

0.990

rpmA

0.990

rpmE2

0.990

rpsI

0.990

rpmH

0.990

Your Current Organism:

Rubrobacter xylanophilus

NCBI taxonomy Id: 266117
Other names: R. xylanophilus DSM 9941, Rubrobacter xylanophilus DSM 9941, Rubrobacter xylanophilus str. DSM 9941, Rubrobacter xylanophilus strain DSM 9941

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	Rxyl_2121	Rxyl_1525	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
rplM	rpmA	Rxyl_2121	Rxyl_1524	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L27; KEGG: tfu:Tfu_2181 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplM	rpmB	Rxyl_2121	Rxyl_1368	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L28; KEGG: tfu:Tfu_0645 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplM	rpmE2	Rxyl_2121	Rxyl_1654	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L31; KEGG: sco:SCO3427 putative 50S ribosomal protein L31.	0.990
rplM	rpmF	Rxyl_2121	Rxyl_1376	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ttj:TTHA0418 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplM	rpmH	Rxyl_2121	Rxyl_3216	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L34; KEGG: mhp:MHP7448_0678 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.992
rplM	rpsI	Rxyl_2121	Rxyl_2120	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S9; KEGG: bld:BLi00168 ribosomal protein S9; RBL04975; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	Rxyl_2121	Rxyl_1417	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.999
rplM	rpsP	Rxyl_2121	Rxyl_1388	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S16; KEGG: gka:GK1197 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplM	rpsT	Rxyl_2121	Rxyl_1517	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.996
rplU	rplM	Rxyl_1525	Rxyl_2121	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.998
rplU	rpmA	Rxyl_1525	Rxyl_1524	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L27; KEGG: tfu:Tfu_2181 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	Rxyl_1525	Rxyl_1368	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L28; KEGG: tfu:Tfu_0645 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplU	rpmE2	Rxyl_1525	Rxyl_1654	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L31; KEGG: sco:SCO3427 putative 50S ribosomal protein L31.	0.990
rplU	rpmF	Rxyl_1525	Rxyl_1376	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: ttj:TTHA0418 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplU	rpmH	Rxyl_1525	Rxyl_3216	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L34; KEGG: mhp:MHP7448_0678 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.992
rplU	rpsI	Rxyl_1525	Rxyl_2120	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S9; KEGG: bld:BLi00168 ribosomal protein S9; RBL04975; Belongs to the universal ribosomal protein uS9 family.	0.998
rplU	rpsO	Rxyl_1525	Rxyl_1417	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.992
rplU	rpsP	Rxyl_1525	Rxyl_1388	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S16; KEGG: gka:GK1197 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rplU	rpsT	Rxyl_1525	Rxyl_1517	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.996

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