node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rxyl_0007 | trmB | Rxyl_0007 | Rxyl_2026 | PFAM: protein of unknown function DUF88; KEGG: ade:Adeh_2817 protein of unknown function DUF88. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.540 |
Rxyl_2024 | Rxyl_2025 | Rxyl_2024 | Rxyl_2025 | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | KEGG: sth:STH848 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase 5'-3' exonuclease; SMART: Helix-hairpin-helix motif, class 2. | 0.854 |
Rxyl_2024 | rpmD | Rxyl_2024 | Rxyl_2137 | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | PFAM: ribosomal protein L30; KEGG: mpa:MAP4185 50S ribosomal protein L30. | 0.976 |
Rxyl_2024 | rsmA | Rxyl_2024 | Rxyl_0892 | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.744 |
Rxyl_2024 | trmB | Rxyl_2024 | Rxyl_2026 | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.598 |
Rxyl_2024 | truA | Rxyl_2024 | Rxyl_2123 | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.454 |
Rxyl_2024 | truB | Rxyl_2024 | Rxyl_1415 | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.833 |
Rxyl_2025 | Rxyl_2024 | Rxyl_2025 | Rxyl_2024 | KEGG: sth:STH848 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase 5'-3' exonuclease; SMART: Helix-hairpin-helix motif, class 2. | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | 0.854 |
Rxyl_2025 | rsmA | Rxyl_2025 | Rxyl_0892 | KEGG: sth:STH848 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase 5'-3' exonuclease; SMART: Helix-hairpin-helix motif, class 2. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.550 |
Rxyl_2025 | trmB | Rxyl_2025 | Rxyl_2026 | KEGG: sth:STH848 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase 5'-3' exonuclease; SMART: Helix-hairpin-helix motif, class 2. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.752 |
Rxyl_2025 | truB | Rxyl_2025 | Rxyl_1415 | KEGG: sth:STH848 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase 5'-3' exonuclease; SMART: Helix-hairpin-helix motif, class 2. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.554 |
Rxyl_2805 | trmB | Rxyl_2805 | Rxyl_2026 | PFAM: protein of unknown function DUF88; KEGG: tth:TTC0692 hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.540 |
rpmD | Rxyl_2024 | Rxyl_2137 | Rxyl_2024 | PFAM: ribosomal protein L30; KEGG: mpa:MAP4185 50S ribosomal protein L30. | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | 0.976 |
rpmD | rsmA | Rxyl_2137 | Rxyl_0892 | PFAM: ribosomal protein L30; KEGG: mpa:MAP4185 50S ribosomal protein L30. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.659 |
rpmD | trmB | Rxyl_2137 | Rxyl_2026 | PFAM: ribosomal protein L30; KEGG: mpa:MAP4185 50S ribosomal protein L30. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.646 |
rpmD | truA | Rxyl_2137 | Rxyl_2123 | PFAM: ribosomal protein L30; KEGG: mpa:MAP4185 50S ribosomal protein L30. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.616 |
rpmD | truB | Rxyl_2137 | Rxyl_1415 | PFAM: ribosomal protein L30; KEGG: mpa:MAP4185 50S ribosomal protein L30. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.680 |
rsmA | Rxyl_2024 | Rxyl_0892 | Rxyl_2024 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | SSU ribosomal protein S1P; PFAM: RNA binding S1; KEGG: tfu:Tfu_1191 RNA binding S1. | 0.744 |
rsmA | Rxyl_2025 | Rxyl_0892 | Rxyl_2025 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | KEGG: sth:STH848 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase 5'-3' exonuclease; SMART: Helix-hairpin-helix motif, class 2. | 0.550 |
rsmA | rpmD | Rxyl_0892 | Rxyl_2137 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | PFAM: ribosomal protein L30; KEGG: mpa:MAP4185 50S ribosomal protein L30. | 0.659 |