STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virD4annotation not available (729 aa)    
Predicted Functional Partners:
Rmet_2333
annotation not available
 
  
 0.985
Rmet_2337
annotation not available
 
  
 0.985
Rmet_2334
annotation not available
 
  
 0.980
pilL
annotation not available
 
  
 0.978
Rmet_2335
annotation not available
 
     0.977
Rmet_2332
annotation not available
 
    0.975
alpA
annotation not available
 
   
 0.933
Rmet_2364
annotation not available
 
   
 0.908
soj
annotation not available
 
  
 0.900
Rmet_2330
annotation not available
 
     0.895
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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