Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rmet_2327 | Rmet_2330 | Rmet_2327 | Rmet_2330 | Putative adenine-specific DNA methyltransferase. | Putative plasmid-related DNA/RNA helicase. | 0.911 |
Rmet_2327 | Rmet_2333 | Rmet_2327 | Rmet_2333 | Putative adenine-specific DNA methyltransferase. | Conserved putative exported protein. | 0.818 |
Rmet_2327 | Rmet_2334 | Rmet_2327 | Rmet_2334 | Putative adenine-specific DNA methyltransferase. | Putative lytic transglycosylase, catalytic. | 0.805 |
Rmet_2327 | Rmet_2335 | Rmet_2327 | Rmet_2335 | Putative adenine-specific DNA methyltransferase. | Putative exported protein. | 0.817 |
Rmet_2327 | Rmet_2337 | Rmet_2327 | Rmet_2337 | Putative adenine-specific DNA methyltransferase. | Conserved hypothetical protein. | 0.818 |
Rmet_2327 | Rmet_2349 | Rmet_2327 | Rmet_2349 | Putative adenine-specific DNA methyltransferase. | Conserved hypothetical protein. | 0.761 |
Rmet_2327 | Rmet_2352 | Rmet_2327 | Rmet_2352 | Putative adenine-specific DNA methyltransferase. | Putative secreted protein. | 0.767 |
Rmet_2327 | alpA | Rmet_2327 | Rmet_2289 | Putative adenine-specific DNA methyltransferase. | DNA-binding transcriptional activator. | 0.694 |
Rmet_2327 | pilL | Rmet_2327 | Rmet_2331 | Putative adenine-specific DNA methyltransferase. | pilL lipoprotein (type IV pili). | 0.819 |
Rmet_2327 | virD4 | Rmet_2327 | Rmet_2336 | Putative adenine-specific DNA methyltransferase. | VirD4, Type IV secretory pathway, VirD4 components. | 0.815 |
Rmet_2330 | Rmet_2327 | Rmet_2330 | Rmet_2327 | Putative plasmid-related DNA/RNA helicase. | Putative adenine-specific DNA methyltransferase. | 0.911 |
Rmet_2330 | Rmet_2333 | Rmet_2330 | Rmet_2333 | Putative plasmid-related DNA/RNA helicase. | Conserved putative exported protein. | 0.881 |
Rmet_2330 | Rmet_2334 | Rmet_2330 | Rmet_2334 | Putative plasmid-related DNA/RNA helicase. | Putative lytic transglycosylase, catalytic. | 0.871 |
Rmet_2330 | Rmet_2335 | Rmet_2330 | Rmet_2335 | Putative plasmid-related DNA/RNA helicase. | Putative exported protein. | 0.882 |
Rmet_2330 | Rmet_2337 | Rmet_2330 | Rmet_2337 | Putative plasmid-related DNA/RNA helicase. | Conserved hypothetical protein. | 0.880 |
Rmet_2330 | Rmet_2349 | Rmet_2330 | Rmet_2349 | Putative plasmid-related DNA/RNA helicase. | Conserved hypothetical protein. | 0.767 |
Rmet_2330 | Rmet_2352 | Rmet_2330 | Rmet_2352 | Putative plasmid-related DNA/RNA helicase. | Putative secreted protein. | 0.772 |
Rmet_2330 | alpA | Rmet_2330 | Rmet_2289 | Putative plasmid-related DNA/RNA helicase. | DNA-binding transcriptional activator. | 0.706 |
Rmet_2330 | pilL | Rmet_2330 | Rmet_2331 | Putative plasmid-related DNA/RNA helicase. | pilL lipoprotein (type IV pili). | 0.884 |
Rmet_2330 | virD4 | Rmet_2330 | Rmet_2336 | Putative plasmid-related DNA/RNA helicase. | VirD4, Type IV secretory pathway, VirD4 components. | 0.876 |
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