Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rmet_0945 | Rmet_0968 | Rmet_0945 | Rmet_0968 | Acyl-CoA dehydrogenase. | Acyl-CoA dehydrogenase (ACAD). | 0.580 |
Rmet_0945 | Rmet_2795 | Rmet_0945 | Rmet_2795 | Acyl-CoA dehydrogenase. | Enoyl-CoA hydratase/isomerase. | 0.719 |
Rmet_0968 | Rmet_0945 | Rmet_0968 | Rmet_0945 | Acyl-CoA dehydrogenase (ACAD). | Acyl-CoA dehydrogenase. | 0.580 |
Rmet_0968 | Rmet_2795 | Rmet_0968 | Rmet_2795 | Acyl-CoA dehydrogenase (ACAD). | Enoyl-CoA hydratase/isomerase. | 0.724 |
Rmet_0968 | aidB | Rmet_0968 | Rmet_0161 | Acyl-CoA dehydrogenase (ACAD). | Isovaleryl CoA dehydrogenase. | 0.444 |
Rmet_0968 | fadA | Rmet_0968 | Rmet_0387 | Acyl-CoA dehydrogenase (ACAD). | acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.934 |
Rmet_1814 | Rmet_2795 | Rmet_1814 | Rmet_2795 | acyl-CoA dehydrogenase, short-chain specific. | Enoyl-CoA hydratase/isomerase. | 0.719 |
Rmet_1814 | fadA | Rmet_1814 | Rmet_0387 | acyl-CoA dehydrogenase, short-chain specific. | acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.933 |
Rmet_2199 | Rmet_2217 | Rmet_2199 | Rmet_2217 | acyl-CoA dehydrogenase-like protein. | Acyl-CoA dehydrogenase. | 0.436 |
Rmet_2199 | Rmet_2795 | Rmet_2199 | Rmet_2795 | acyl-CoA dehydrogenase-like protein. | Enoyl-CoA hydratase/isomerase. | 0.725 |
Rmet_2199 | fadA | Rmet_2199 | Rmet_0387 | acyl-CoA dehydrogenase-like protein. | acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.933 |
Rmet_2217 | Rmet_2199 | Rmet_2217 | Rmet_2199 | Acyl-CoA dehydrogenase. | acyl-CoA dehydrogenase-like protein. | 0.436 |
Rmet_2217 | Rmet_2795 | Rmet_2217 | Rmet_2795 | Acyl-CoA dehydrogenase. | Enoyl-CoA hydratase/isomerase. | 0.719 |
Rmet_2795 | Rmet_0945 | Rmet_2795 | Rmet_0945 | Enoyl-CoA hydratase/isomerase. | Acyl-CoA dehydrogenase. | 0.719 |
Rmet_2795 | Rmet_0968 | Rmet_2795 | Rmet_0968 | Enoyl-CoA hydratase/isomerase. | Acyl-CoA dehydrogenase (ACAD). | 0.724 |
Rmet_2795 | Rmet_1814 | Rmet_2795 | Rmet_1814 | Enoyl-CoA hydratase/isomerase. | acyl-CoA dehydrogenase, short-chain specific. | 0.719 |
Rmet_2795 | Rmet_2199 | Rmet_2795 | Rmet_2199 | Enoyl-CoA hydratase/isomerase. | acyl-CoA dehydrogenase-like protein. | 0.725 |
Rmet_2795 | Rmet_2217 | Rmet_2795 | Rmet_2217 | Enoyl-CoA hydratase/isomerase. | Acyl-CoA dehydrogenase. | 0.719 |
Rmet_2795 | acdA | Rmet_2795 | Rmet_2599 | Enoyl-CoA hydratase/isomerase. | acyl-CoA dehydrogenase. | 0.751 |
Rmet_2795 | aidB | Rmet_2795 | Rmet_0161 | Enoyl-CoA hydratase/isomerase. | Isovaleryl CoA dehydrogenase. | 0.721 |
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