STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acyPAcylphosphatase. (95 aa)    
Predicted Functional Partners:
ackA2
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.914
pauA
pimeloyl-CoA synthetase.
  
 
  0.913
Rmet_0842
Putative acetyl-CoA synthetase (CoA-binding domain).
  
 
  0.912
ptb
Phosphate acetyltransferase (Phosphotransacetylase).
  
 
 0.911
Rmet_3207
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.906
puuC
gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent; Belongs to the aldehyde dehydrogenase family.
  
 
 0.905
betB
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.905
Rmet_1898
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.905
Rmet_0495
Amidase.
  
 
  0.904
Rmet_1937
Amidase; Belongs to the amidase family.
  
 
  0.903
Your Current Organism:
Cupriavidus metallidurans
NCBI taxonomy Id: 266264
Other names: C. metallidurans CH34, Cupriavidus metallidurans CH34, Cupriavidus metallidurans str. CH34, Cupriavidus metallidurans strain CH34, Ralstonia metallidurans CH34, Wautersia metallidurans CH34
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