Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_A0959 | Bxe_A0960 | Conserved hypothetical protein; TPR domain present. | Transcriptional regulator, ArsR family. | 0.548 |
Bxe_A0959 | Bxe_A0961 | Conserved hypothetical protein; TPR domain present. | Cation (heavy metal) efflux pump, CDF family. | 0.613 |
Bxe_A0960 | Bxe_A0959 | Transcriptional regulator, ArsR family. | Conserved hypothetical protein; TPR domain present. | 0.548 |
Bxe_A0960 | Bxe_A0961 | Transcriptional regulator, ArsR family. | Cation (heavy metal) efflux pump, CDF family. | 0.797 |
Bxe_A0960 | Bxe_A0962 | Transcriptional regulator, ArsR family. | Putative monooxygenase, FAD-binding protein. | 0.541 |
Bxe_A0961 | Bxe_A0959 | Cation (heavy metal) efflux pump, CDF family. | Conserved hypothetical protein; TPR domain present. | 0.613 |
Bxe_A0961 | Bxe_A0960 | Cation (heavy metal) efflux pump, CDF family. | Transcriptional regulator, ArsR family. | 0.797 |
Bxe_A0961 | Bxe_A0962 | Cation (heavy metal) efflux pump, CDF family. | Putative monooxygenase, FAD-binding protein. | 0.459 |
Bxe_A0961 | Bxe_A1368 | Cation (heavy metal) efflux pump, CDF family. | Putative hydrolase. | 0.899 |
Bxe_A0961 | Bxe_A3829 | Cation (heavy metal) efflux pump, CDF family. | Cation/heavy metal (cadmium/manganese) transporting (P-type) ATPase. | 0.421 |
Bxe_A0961 | Bxe_B1515 | Cation (heavy metal) efflux pump, CDF family. | Divalent cation transporting (P-type) ATPase. | 0.429 |
Bxe_A0961 | Bxe_B2642 | Cation (heavy metal) efflux pump, CDF family. | Magnesium-translocating P-type ATPase. | 0.418 |
Bxe_A0962 | Bxe_A0960 | Putative monooxygenase, FAD-binding protein. | Transcriptional regulator, ArsR family. | 0.541 |
Bxe_A0962 | Bxe_A0961 | Putative monooxygenase, FAD-binding protein. | Cation (heavy metal) efflux pump, CDF family. | 0.459 |
Bxe_A1368 | Bxe_A0961 | Putative hydrolase. | Cation (heavy metal) efflux pump, CDF family. | 0.899 |
Bxe_A3829 | Bxe_A0961 | Cation/heavy metal (cadmium/manganese) transporting (P-type) ATPase. | Cation (heavy metal) efflux pump, CDF family. | 0.421 |
Bxe_B1515 | Bxe_A0961 | Divalent cation transporting (P-type) ATPase. | Cation (heavy metal) efflux pump, CDF family. | 0.429 |
Bxe_B2642 | Bxe_A0961 | Magnesium-translocating P-type ATPase. | Cation (heavy metal) efflux pump, CDF family. | 0.418 |