Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bxe_A1183 | Bxe_A1184 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.945 |
Bxe_A1184 | Bxe_A1183 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.945 |
Bxe_A1184 | Bxe_A1755 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB3/TraD. | 0.916 |
Bxe_A1184 | Bxe_A1759 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB8/TraJ. | 0.907 |
Bxe_A1184 | Bxe_A1761 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB10. | 0.815 |
Bxe_A1184 | Bxe_A2650 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB10. | 0.815 |
Bxe_A1184 | Bxe_A2652 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB8/TraJ. | 0.907 |
Bxe_A1184 | Bxe_A2656 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB3/TraD. | 0.916 |
Bxe_A1184 | Bxe_C0449 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB3/TraD. | 0.916 |
Bxe_A1184 | Bxe_C0453 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB8/TraJ. | 0.907 |
Bxe_A1184 | Bxe_C0455 | Conserved hypothetical protein. | Putative type IV secretion system protein VirB10. | 0.815 |
Bxe_A1755 | Bxe_A1184 | Putative type IV secretion system protein VirB3/TraD. | Conserved hypothetical protein. | 0.916 |
Bxe_A1755 | Bxe_A1759 | Putative type IV secretion system protein VirB3/TraD. | Putative type IV secretion system protein VirB8/TraJ. | 0.941 |
Bxe_A1755 | Bxe_A1761 | Putative type IV secretion system protein VirB3/TraD. | Putative type IV secretion system protein VirB10. | 0.859 |
Bxe_A1755 | Bxe_A2650 | Putative type IV secretion system protein VirB3/TraD. | Putative type IV secretion system protein VirB10. | 0.772 |
Bxe_A1755 | Bxe_A2652 | Putative type IV secretion system protein VirB3/TraD. | Putative type IV secretion system protein VirB8/TraJ. | 0.905 |
Bxe_A1755 | Bxe_C0453 | Putative type IV secretion system protein VirB3/TraD. | Putative type IV secretion system protein VirB8/TraJ. | 0.905 |
Bxe_A1755 | Bxe_C0455 | Putative type IV secretion system protein VirB3/TraD. | Putative type IV secretion system protein VirB10. | 0.772 |
Bxe_A1759 | Bxe_A1184 | Putative type IV secretion system protein VirB8/TraJ. | Conserved hypothetical protein. | 0.907 |
Bxe_A1759 | Bxe_A1755 | Putative type IV secretion system protein VirB8/TraJ. | Putative type IV secretion system protein VirB3/TraD. | 0.941 |
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