STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A1255Putative major facilitator family (MFS)tranporter. (413 aa)    
Predicted Functional Partners:
Bxe_A3180
Putative membrane protein DUF328; Belongs to the UPF0246 family.
  
    0.895
Bxe_A0145
flgG; flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.565
Bxe_A1254
Putative membrane-bound lytic murein transglycosylase.
       0.489
Bxe_C1228
Major facilitator superfamily (MFS) anion(metabolite)/cation symporter.
 
  
  0.423
Bxe_A1537
Putative exported protein.
   
   0.402
Bxe_A2128
Hypothetical protein.
   
   0.402
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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