STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adcAcetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family. (252 aa)    
Predicted Functional Partners:
Bxe_A4270
hydroxymethylglutaryl-CoA lyase.
  
  
  0.925
Bxe_A2729
hydroxymethylglutaryl-CoA lyase.
  
  
  0.921
Bxe_A3156
3-hydroxybutyrate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.919
Bxe_B0969
Putative short-chain alcohol dehydrogenase.
    
  0.859
Bxe_A1366
3-oxoacid CoA-transferase.
    
 0.830
Bxe_C0572
3-oxoacid CoA-transferase, subunit A.
    
 0.830
Bxe_A1367
butyryl-CoA:acetate CoA transferase.
    
 0.818
Bxe_C0573
butyryl-CoA:acetate CoA transferase.
    
 0.818
Bxe_C1043
Putative dehydrogenase.
    
  0.799
Bxe_A3155
Putative transmembrane protein, patatin- like phospholipase domain.
 
   
 0.791
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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