STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A2975Hypothetical protein. (923 aa)    
Predicted Functional Partners:
Bxe_A2969
Putative transmembrane protein.
 
   
 0.921
Bxe_A2970
Putative lipopolysaccharide N- acetylglucosaminyltransferase.
 
   
 0.895
Bxe_A2974
Putative signal peptide protein, TPR domain- containing.
  
  
 0.859
Bxe_A2968
Hypothetical protein.
 
   
 0.834
Bxe_A2973
Hypothetical protein.
     
 0.768
Bxe_A2972
Putative transmembrane protein.
     
 0.667
Bxe_B2693
Regulatory protein.
  
     0.663
Bxe_A2971
Putative transmembrane protein.
     
 0.658
Bxe_A4325
Putative hemagglutinin-related transmembrane protein.
  
     0.649
Bxe_B2007
Response regulator receiver sensor signal transduction histidine kinase.
  
     0.624
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.