STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bxe_A3826Glutamate decarboxylase; Belongs to the group II decarboxylase family. (461 aa)    
Predicted Functional Partners:
Bxe_A3825
Amino acid/polyamine/organocation transporter, APC superfamily; TC 2.A.3.
 
 
 0.950
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.904
Bxe_A0365
Glutamate synthase (NADH) large subunit.
    
 0.900
glsA
Glutaminase; Belongs to the glutaminase family.
  
 
 0.882
Bxe_A0049
Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.861
Bxe_C0552
Amino acid/polyamine/organocation transporter, APC superfamily; TC 2.A.3.
 
 
 0.851
Bxe_B0942
L-glutamine synthetase.
    
 0.817
Bxe_A0596
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.815
Bxe_A1522
L-glutamine synthetase.
    
 0.814
Bxe_A0644
Gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03.
     
 0.809
Your Current Organism:
Paraburkholderia xenovorans
NCBI taxonomy Id: 266265
Other names: Burkholderia cepacia LB400, Burkholderia fungorum LB400, Burkholderia sp. LB400, Burkholderia xenovorans LB400, P. xenovorans LB400, Paraburkholderia xenovorans LB400, Pseudomonas LB400, Pseudomonas sp. (strain LB400), Pseudomonas sp. LB400
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